BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035A06LP1|AL429980
(910 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1754 568 e-162
3x_Contig762 501 e-141
>3x_Contig1754
Length = 26052
Score = 568 bits (286), Expect = e-162
Identities = 302/306 (98%), Gaps = 1/306 (0%)
Strand = Plus / Minus
Query: 18 ttaagtgcatttatataagcattattttggcgtttggttcaaaatattcatcaatgtgtt 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttaagtgcatttatataagcattattttggcgtttggttcaaaatattcatcaatgtgtt 249
Query: 78 taattgcgcagttggatcgaaattttgtgggggttgaggagatttttggcccgaag-ttg 136
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 248 taattgcgcagttggatcgaaattttgtgggggttgaggagatttttggcccgaaggttg 189
Query: 137 agtagactgatgcgattgctgctgctgctgctgctgcgcagatgatgccgatcccagcag 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 agtagactgatgcgattgctgctgctgctgctgctgcgcagatgatgccgatcccagcag 129
Query: 197 ttgattttgaccatataccattgatggaggctgctgatacaatggctggttataatactg 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ttgattttgaccatataccattgatggaggctgctgatacaatggctggttataatactg 69
Query: 257 ttgttggatttgaggaacgttcggtatttgtgatgtttgaaccggaggaggaggaggaga 316
||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 68 ttgttggattttaggaacgttcggtatttttgatgttttaaccggaggaggaggaggaga 9
Query: 317 tatatt 322
||||||
Sbjct: 8 tatatt 3
>3x_Contig762
Length = 2085
Score = 501 bits (252), Expect = e-141
Identities = 267/270 (98%), Gaps = 2/270 (0%)
Strand = Plus / Minus
Query: 601 taggaccgaaaccaacggcccaacggattctcaaaccatgtgtcggattgccaccaccag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2085 taggaccgaaaccaacggcccaacggattctcaaaccatgtgtcggattgccaccaccag 2026
Query: 661 tgaaatgcgccatgatcstctccgcttctgctcttgaatagactttcacaaaggcgtgct 720
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2025 tgaaatgcgccatgatcctctccgcttctgctcttgaatagactttcacaaaggcgtgct 1966
Query: 721 tacgggcattattcaaaataacactctgaacctcaccgaattgtcttaacattcttgcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1965 tacgggcattattcaaaataacactctgaacctcaccgaattgtcttaacattcttgcaa 1906
Query: 781 tatcatgttctttgaaattttgtgggaca-caccaacgaaaagggttctggaatatactt 839
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1905 tatcatgttctttgaaattttgtgggacaccaccaacgaaaagggttctggaatatactt 1846
Query: 840 ttacgtggt-ccttggcacagttggatcaa 868
||||||||| ||||||||||||||||||||
Sbjct: 1845 ttacgtggtcccttggcacagttggatcaa 1816
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7078
Number of Sequences: 1807
Number of extensions: 7078
Number of successful extensions: 335
Number of sequences better than 1.0e-20: 2
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)